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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12679308 chr8:29748756 C/G BIN3 chr8:22477931-22526661:- 0.52 6.22 1.31E-9 Box Plot
BLCA rs12679308 chr8:29748756 C/G CCDC25 chr8:27590828-27630170:- 0.73 7.84 4.52E-14 Box Plot
BLCA rs12679308 chr8:29748756 C/G CHMP7 chr8:23101150-23119513:+ 0.66 7.56 3.07E-13 Box Plot
BLCA rs12679308 chr8:29748756 C/G CNOT7 chr8:17082473-17104387:- 0.72 8.06 1.0E-14 Box Plot
BLCA rs12679308 chr8:29748756 C/G ELP3 chr8:27947190-28048673:+ 0.67 7.08 6.81E-12 Box Plot
BLCA rs12679308 chr8:29748756 C/G ENTPD4 chr8:23243296-23315208:- 0.51 6.53 2.09E-10 Box Plot
BLCA rs12679308 chr8:29748756 C/G ERICH1 chr8:564746-688106:- 0.64 6.09 2.76E-9 Box Plot
BLCA rs12679308 chr8:29748756 C/G HMBOX1 chr8:28747911-28922281:+ 0.54 6.03 3.87E-9 Box Plot
BLCA rs12679308 chr8:29748756 C/G INTS10 chr8:19674651-19709594:+ 0.62 6.96 1.46E-11 Box Plot
BLCA rs12679308 chr8:29748756 C/G INTS9 chr8:28625178-28747759:- 0.73 7.82 5.3E-14 Box Plot
BLCA rs12679308 chr8:29748756 C/G KCTD9 chr8:25285363-25315992:- 0.45 6.07 3.1E-9 Box Plot
BLCA rs12679308 chr8:29748756 C/G KIAA1967 chr8:22462257-22477981:+ 0.66 7.19 3.48E-12 Box Plot
BLCA rs12679308 chr8:29748756 C/G PBK chr8:27667137-27695612:- 0.42 6.25 1.12E-9 Box Plot
BLCA rs12679308 chr8:29748756 C/G PCM1 chr8:17780349-17887453:+ 0.52 6.08 2.94E-9 Box Plot
BLCA rs12679308 chr8:29748756 C/G POLR3D chr8:22102617-22112113:+ 0.54 6.14 2.01E-9 Box Plot